Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.92■■□□□ 1.1
TprF6ZDS4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TprF6ZDS4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TprF6ZDS4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.91■■□□□ 1.1
TprF6ZDS4 Gm7332-201ENSMUST00000118351 454 ntBASIC21.9■■□□□ 1.1
TprF6ZDS4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TprF6ZDS4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TprF6ZDS4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TprF6ZDS4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TprF6ZDS4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TprF6ZDS4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TprF6ZDS4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TprF6ZDS4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.88■■□□□ 1.09
TprF6ZDS4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TprF6ZDS4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TprF6ZDS4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TprF6ZDS4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.87■■□□□ 1.09
TprF6ZDS4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TprF6ZDS4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TprF6ZDS4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TprF6ZDS4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.86■■□□□ 1.09
TprF6ZDS4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TprF6ZDS4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TprF6ZDS4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.84■■□□□ 1.09
TprF6ZDS4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.84■■□□□ 1.09
TprF6ZDS4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.84■■□□□ 1.09
TprF6ZDS4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TprF6ZDS4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.84■■□□□ 1.09
TprF6ZDS4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TprF6ZDS4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TprF6ZDS4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TprF6ZDS4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.82■■□□□ 1.08
TprF6ZDS4 Gm16437-201ENSMUST00000025669 507 ntBASIC21.82■■□□□ 1.08
TprF6ZDS4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.82■■□□□ 1.08
TprF6ZDS4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TprF6ZDS4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.82■■□□□ 1.08
TprF6ZDS4 Scarna2-201ENSMUST00000157560 414 ntBASIC21.81■■□□□ 1.08
TprF6ZDS4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.81■■□□□ 1.08
TprF6ZDS4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.81■■□□□ 1.08
TprF6ZDS4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TprF6ZDS4 Gm30023-201ENSMUST00000197970 889 ntBASIC21.81■■□□□ 1.08
TprF6ZDS4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.81■■□□□ 1.08
TprF6ZDS4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TprF6ZDS4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TprF6ZDS4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TprF6ZDS4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TprF6ZDS4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.8■■□□□ 1.08
TprF6ZDS4 Gm11687-201ENSMUST00000118911 886 ntBASIC21.79■■□□□ 1.08
TprF6ZDS4 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.79■■□□□ 1.08
TprF6ZDS4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TprF6ZDS4 Gm45364-201ENSMUST00000210883 159 ntBASIC21.78■■□□□ 1.08
TprF6ZDS4 Gm9806-201ENSMUST00000051080 552 ntBASIC21.78■■□□□ 1.08
TprF6ZDS4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.77■■□□□ 1.08
TprF6ZDS4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TprF6ZDS4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.77■■□□□ 1.08
TprF6ZDS4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TprF6ZDS4 Serp2-204ENSMUST00000228055 705 ntBASIC21.76■■□□□ 1.07
TprF6ZDS4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TprF6ZDS4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TprF6ZDS4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.74■■□□□ 1.07
TprF6ZDS4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TprF6ZDS4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TprF6ZDS4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TprF6ZDS4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TprF6ZDS4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TprF6ZDS4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.72■■□□□ 1.07
TprF6ZDS4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.72■■□□□ 1.07
TprF6ZDS4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TprF6ZDS4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TprF6ZDS4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.71■■□□□ 1.07
TprF6ZDS4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TprF6ZDS4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.7■■□□□ 1.06
TprF6ZDS4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.7■■□□□ 1.06
TprF6ZDS4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TprF6ZDS4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TprF6ZDS4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TprF6ZDS4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.69■■□□□ 1.06
TprF6ZDS4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TprF6ZDS4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TprF6ZDS4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TprF6ZDS4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TprF6ZDS4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TprF6ZDS4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TprF6ZDS4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TprF6ZDS4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.66■■□□□ 1.06
TprF6ZDS4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TprF6ZDS4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TprF6ZDS4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TprF6ZDS4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TprF6ZDS4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TprF6ZDS4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TprF6ZDS4 Gm5921-201ENSMUST00000075898 882 ntBASIC21.64■■□□□ 1.05
TprF6ZDS4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TprF6ZDS4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TprF6ZDS4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TprF6ZDS4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TprF6ZDS4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TprF6ZDS4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.62■■□□□ 1.05
TprF6ZDS4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TprF6ZDS4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms