Protein–RNA interactions for Protein: E9Q5I3

Muc5b, Mucin 5, subtype B, tracheobronchial, mousemouse

Predictions only

Length 4,800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Muc5bE9Q5I3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Muc5bE9Q5I3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Muc5bE9Q5I3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Muc5bE9Q5I3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Muc5bE9Q5I3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Muc5bE9Q5I3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.87□□□□□ -0.67
Muc5bE9Q5I3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Muc5bE9Q5I3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.86□□□□□ -0.67
Muc5bE9Q5I3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Muc5bE9Q5I3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC10.86□□□□□ -0.67
Muc5bE9Q5I3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Muc5bE9Q5I3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Muc5bE9Q5I3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Muc5bE9Q5I3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC10.83□□□□□ -0.68
Muc5bE9Q5I3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC10.83□□□□□ -0.68
Muc5bE9Q5I3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC10.83□□□□□ -0.68
Muc5bE9Q5I3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Muc5bE9Q5I3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Muc5bE9Q5I3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Muc5bE9Q5I3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Muc5bE9Q5I3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Muc5bE9Q5I3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC10.77□□□□□ -0.68
Muc5bE9Q5I3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC10.77□□□□□ -0.69
Muc5bE9Q5I3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Muc5bE9Q5I3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Muc5bE9Q5I3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Muc5bE9Q5I3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Gm30023-201ENSMUST00000197970 889 ntBASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Muc5bE9Q5I3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Muc5bE9Q5I3 Gm45364-201ENSMUST00000210883 159 ntBASIC10.74□□□□□ -0.69
Muc5bE9Q5I3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Muc5bE9Q5I3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Muc5bE9Q5I3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms