Protein–RNA interactions for Protein: A0A1B0GSN8

A730046J19Rik, RIKEN cDNA A730046J19 gene, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730046J19RikA0A1B0GSN8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
A730046J19RikA0A1B0GSN8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
A730046J19RikA0A1B0GSN8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.5■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Gm26115-201ENSMUST00000175605 87 ntBASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
A730046J19RikA0A1B0GSN8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
A730046J19RikA0A1B0GSN8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
A730046J19RikA0A1B0GSN8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
A730046J19RikA0A1B0GSN8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Gm8109-201ENSMUST00000194076 746 ntBASIC17.4■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
A730046J19RikA0A1B0GSN8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
A730046J19RikA0A1B0GSN8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.36■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.33■□□□□ 0.37
A730046J19RikA0A1B0GSN8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
A730046J19RikA0A1B0GSN8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
A730046J19RikA0A1B0GSN8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
A730046J19RikA0A1B0GSN8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms