Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.29■■□□□ 1
Ighv1-78A0A0G2JGN3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-78A0A0G2JGN3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-78A0A0G2JGN3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-78A0A0G2JGN3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-78A0A0G2JGN3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.27■■□□□ 1
Ighv1-78A0A0G2JGN3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-78A0A0G2JGN3 Particl-201ENSMUST00000205370 1560 ntBASIC21.27■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-78A0A0G2JGN3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.25■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-78A0A0G2JGN3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.24■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-78A0A0G2JGN3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.21■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.21■□□□□ 0.99
Ighv1-78A0A0G2JGN3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-78A0A0G2JGN3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.2■□□□□ 0.98
Ighv1-78A0A0G2JGN3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Gm11599-201ENSMUST00000118720 878 ntBASIC21.19■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ighv1-78A0A0G2JGN3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.18■□□□□ 0.98
Ighv1-78A0A0G2JGN3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv1-78A0A0G2JGN3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-78A0A0G2JGN3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-78A0A0G2JGN3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ighv1-78A0A0G2JGN3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.08■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-78A0A0G2JGN3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.07■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.07■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm37136-201ENSMUST00000194368 194 ntBASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.06■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-78A0A0G2JGN3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.02■□□□□ 0.96
Ighv1-78A0A0G2JGN3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.98■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.96■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-78A0A0G2JGN3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms