Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.05■□□□□ 0.48
Trav7-1A0A0G2JEV5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-1A0A0G2JEV5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-1A0A0G2JEV5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-1A0A0G2JEV5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav7-1A0A0G2JEV5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav7-1A0A0G2JEV5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-1A0A0G2JEV5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-1A0A0G2JEV5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.03■□□□□ 0.48
Trav7-1A0A0G2JEV5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-1A0A0G2JEV5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-1A0A0G2JEV5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav7-1A0A0G2JEV5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav7-1A0A0G2JEV5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trav7-1A0A0G2JEV5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav7-1A0A0G2JEV5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav7-1A0A0G2JEV5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-1A0A0G2JEV5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-1A0A0G2JEV5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-1A0A0G2JEV5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav7-1A0A0G2JEV5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-1A0A0G2JEV5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-1A0A0G2JEV5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-1A0A0G2JEV5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-1A0A0G2JEV5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav7-1A0A0G2JEV5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-1A0A0G2JEV5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-1A0A0G2JEV5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-1A0A0G2JEV5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.97■□□□□ 0.47
Trav7-1A0A0G2JEV5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-1A0A0G2JEV5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-1A0A0G2JEV5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav7-1A0A0G2JEV5 Zfp131-205ENSMUST00000223812 663 ntBASIC17.96■□□□□ 0.47
Trav7-1A0A0G2JEV5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav7-1A0A0G2JEV5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav7-1A0A0G2JEV5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.94■□□□□ 0.46
Trav7-1A0A0G2JEV5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-1A0A0G2JEV5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-1A0A0G2JEV5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-1A0A0G2JEV5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-1A0A0G2JEV5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav7-1A0A0G2JEV5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-1A0A0G2JEV5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-1A0A0G2JEV5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-1A0A0G2JEV5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-1A0A0G2JEV5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav7-1A0A0G2JEV5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-1A0A0G2JEV5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-1A0A0G2JEV5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7-1A0A0G2JEV5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trav7-1A0A0G2JEV5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7-1A0A0G2JEV5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav7-1A0A0G2JEV5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trav7-1A0A0G2JEV5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Gm9397-201ENSMUST00000200125 605 ntBASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trav7-1A0A0G2JEV5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Gm24970-201ENSMUST00000175582 82 ntBASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-1A0A0G2JEV5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms