Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trbv26A0A0B4J1P5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.52■□□□□ 0.72
Trbv26A0A0B4J1P5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv26A0A0B4J1P5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv26A0A0B4J1P5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv26A0A0B4J1P5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv26A0A0B4J1P5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.5■□□□□ 0.71
Trbv26A0A0B4J1P5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv26A0A0B4J1P5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv26A0A0B4J1P5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv26A0A0B4J1P5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv26A0A0B4J1P5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv26A0A0B4J1P5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv26A0A0B4J1P5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.47■□□□□ 0.71
Trbv26A0A0B4J1P5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv26A0A0B4J1P5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv26A0A0B4J1P5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv26A0A0B4J1P5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.44■□□□□ 0.7
Trbv26A0A0B4J1P5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv26A0A0B4J1P5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv26A0A0B4J1P5 Gm7432-201ENSMUST00000210343 879 ntBASIC19.42■□□□□ 0.7
Trbv26A0A0B4J1P5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv26A0A0B4J1P5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Trbv26A0A0B4J1P5 Particl-201ENSMUST00000205370 1560 ntBASIC19.41■□□□□ 0.7
Trbv26A0A0B4J1P5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv26A0A0B4J1P5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv26A0A0B4J1P5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.41■□□□□ 0.7
Trbv26A0A0B4J1P5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv26A0A0B4J1P5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.4■□□□□ 0.7
Trbv26A0A0B4J1P5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv26A0A0B4J1P5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv26A0A0B4J1P5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trbv26A0A0B4J1P5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv26A0A0B4J1P5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv26A0A0B4J1P5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv26A0A0B4J1P5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv26A0A0B4J1P5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv26A0A0B4J1P5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
Trbv26A0A0B4J1P5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv26A0A0B4J1P5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trbv26A0A0B4J1P5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv26A0A0B4J1P5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv26A0A0B4J1P5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.35■□□□□ 0.69
Trbv26A0A0B4J1P5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.35■□□□□ 0.69
Trbv26A0A0B4J1P5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv26A0A0B4J1P5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.34■□□□□ 0.69
Trbv26A0A0B4J1P5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.34■□□□□ 0.69
Trbv26A0A0B4J1P5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv26A0A0B4J1P5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv26A0A0B4J1P5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv26A0A0B4J1P5 Gm11599-201ENSMUST00000118720 878 ntBASIC19.31■□□□□ 0.68
Trbv26A0A0B4J1P5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Trbv26A0A0B4J1P5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv26A0A0B4J1P5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv26A0A0B4J1P5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trbv26A0A0B4J1P5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv26A0A0B4J1P5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv26A0A0B4J1P5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv26A0A0B4J1P5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.28■□□□□ 0.68
Trbv26A0A0B4J1P5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv26A0A0B4J1P5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.28■□□□□ 0.68
Trbv26A0A0B4J1P5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv26A0A0B4J1P5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.27■□□□□ 0.68
Trbv26A0A0B4J1P5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv26A0A0B4J1P5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trbv26A0A0B4J1P5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv26A0A0B4J1P5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms