Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv30A0A0B4J1P1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv30A0A0B4J1P1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.69■□□□□ 0.42
Trbv30A0A0B4J1P1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv30A0A0B4J1P1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trbv30A0A0B4J1P1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv30A0A0B4J1P1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv30A0A0B4J1P1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv30A0A0B4J1P1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv30A0A0B4J1P1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv30A0A0B4J1P1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv30A0A0B4J1P1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv30A0A0B4J1P1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv30A0A0B4J1P1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv30A0A0B4J1P1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.66■□□□□ 0.42
Trbv30A0A0B4J1P1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv30A0A0B4J1P1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbv30A0A0B4J1P1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trbv30A0A0B4J1P1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.65■□□□□ 0.42
Trbv30A0A0B4J1P1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv30A0A0B4J1P1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv30A0A0B4J1P1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trbv30A0A0B4J1P1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv30A0A0B4J1P1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv30A0A0B4J1P1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv30A0A0B4J1P1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv30A0A0B4J1P1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv30A0A0B4J1P1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv30A0A0B4J1P1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv30A0A0B4J1P1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv30A0A0B4J1P1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv30A0A0B4J1P1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv30A0A0B4J1P1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.61■□□□□ 0.41
Trbv30A0A0B4J1P1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv30A0A0B4J1P1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv30A0A0B4J1P1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv30A0A0B4J1P1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv30A0A0B4J1P1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv30A0A0B4J1P1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv30A0A0B4J1P1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv30A0A0B4J1P1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trbv30A0A0B4J1P1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv30A0A0B4J1P1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv30A0A0B4J1P1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv30A0A0B4J1P1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv30A0A0B4J1P1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv30A0A0B4J1P1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trbv30A0A0B4J1P1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv30A0A0B4J1P1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv30A0A0B4J1P1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv30A0A0B4J1P1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv30A0A0B4J1P1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv30A0A0B4J1P1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv30A0A0B4J1P1 Particl-201ENSMUST00000205370 1560 ntBASIC17.54■□□□□ 0.4
Trbv30A0A0B4J1P1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trbv30A0A0B4J1P1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv30A0A0B4J1P1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trbv30A0A0B4J1P1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv30A0A0B4J1P1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv30A0A0B4J1P1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv30A0A0B4J1P1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv30A0A0B4J1P1 Gm7432-201ENSMUST00000210343 879 ntBASIC17.51■□□□□ 0.39
Trbv30A0A0B4J1P1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv30A0A0B4J1P1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv30A0A0B4J1P1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv30A0A0B4J1P1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trbv30A0A0B4J1P1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv30A0A0B4J1P1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trbv30A0A0B4J1P1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.49■□□□□ 0.39
Trbv30A0A0B4J1P1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.49■□□□□ 0.39
Trbv30A0A0B4J1P1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv30A0A0B4J1P1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv30A0A0B4J1P1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv30A0A0B4J1P1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms