Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv4-50A0A0B4J1J0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv4-50A0A0B4J1J0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.87■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Igkv4-50A0A0B4J1J0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.85■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv4-50A0A0B4J1J0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv4-50A0A0B4J1J0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv4-50A0A0B4J1J0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Igkv4-50A0A0B4J1J0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv4-50A0A0B4J1J0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.75■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.74■□□□□ 0.75
Igkv4-50A0A0B4J1J0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Igkv4-50A0A0B4J1J0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Nkain2-201ENSMUST00000092602 558 ntBASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-50A0A0B4J1J0 Particl-201ENSMUST00000205370 1560 ntBASIC19.7■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.66■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Igkv4-50A0A0B4J1J0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Igkv4-50A0A0B4J1J0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.64■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.63■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.63■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.63■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms