Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-4-dv10A0A075B651 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-4-dv10A0A075B651 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav4-4-dv10A0A075B651 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav4-4-dv10A0A075B651 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav4-4-dv10A0A075B651 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4-4-dv10A0A075B651 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4-4-dv10A0A075B651 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-4-dv10A0A075B651 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-4-dv10A0A075B651 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav4-4-dv10A0A075B651 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-4-dv10A0A075B651 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-4-dv10A0A075B651 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-4-dv10A0A075B651 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav4-4-dv10A0A075B651 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav4-4-dv10A0A075B651 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-4-dv10A0A075B651 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-4-dv10A0A075B651 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-4-dv10A0A075B651 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-4-dv10A0A075B651 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav4-4-dv10A0A075B651 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav4-4-dv10A0A075B651 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.26■□□□□ 0.51
Trav4-4-dv10A0A075B651 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-4-dv10A0A075B651 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-4-dv10A0A075B651 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav4-4-dv10A0A075B651 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav4-4-dv10A0A075B651 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trav4-4-dv10A0A075B651 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.23■□□□□ 0.51
Trav4-4-dv10A0A075B651 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4-4-dv10A0A075B651 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4-4-dv10A0A075B651 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4-4-dv10A0A075B651 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-4-dv10A0A075B651 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trav4-4-dv10A0A075B651 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav4-4-dv10A0A075B651 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-4-dv10A0A075B651 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-4-dv10A0A075B651 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-4-dv10A0A075B651 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-4-dv10A0A075B651 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-4-dv10A0A075B651 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 Particl-201ENSMUST00000205370 1560 ntBASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.18■□□□□ 0.5
Trav4-4-dv10A0A075B651 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-4-dv10A0A075B651 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-4-dv10A0A075B651 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trav4-4-dv10A0A075B651 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav4-4-dv10A0A075B651 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav4-4-dv10A0A075B651 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-4-dv10A0A075B651 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.16■□□□□ 0.5
Trav4-4-dv10A0A075B651 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.16■□□□□ 0.5
Trav4-4-dv10A0A075B651 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-4-dv10A0A075B651 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav4-4-dv10A0A075B651 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav4-4-dv10A0A075B651 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav4-4-dv10A0A075B651 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav4-4-dv10A0A075B651 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav4-4-dv10A0A075B651 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.13■□□□□ 0.49
Trav4-4-dv10A0A075B651 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4-4-dv10A0A075B651 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms