Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16d-dv11A0A075B617 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16d-dv11A0A075B617 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16d-dv11A0A075B617 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16d-dv11A0A075B617 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16d-dv11A0A075B617 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16d-dv11A0A075B617 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav16d-dv11A0A075B617 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16d-dv11A0A075B617 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav16d-dv11A0A075B617 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav16d-dv11A0A075B617 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Trav16d-dv11A0A075B617 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16d-dv11A0A075B617 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav16d-dv11A0A075B617 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16d-dv11A0A075B617 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16d-dv11A0A075B617 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16d-dv11A0A075B617 Peli2-204ENSMUST00000226513 1320 ntBASIC17.16■□□□□ 0.34
Trav16d-dv11A0A075B617 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16d-dv11A0A075B617 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16d-dv11A0A075B617 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16d-dv11A0A075B617 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16d-dv11A0A075B617 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trav16d-dv11A0A075B617 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16d-dv11A0A075B617 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trav16d-dv11A0A075B617 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav16d-dv11A0A075B617 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16d-dv11A0A075B617 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16d-dv11A0A075B617 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16d-dv11A0A075B617 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16d-dv11A0A075B617 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16d-dv11A0A075B617 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav16d-dv11A0A075B617 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16d-dv11A0A075B617 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16d-dv11A0A075B617 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16d-dv11A0A075B617 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16d-dv11A0A075B617 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16d-dv11A0A075B617 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16d-dv11A0A075B617 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16d-dv11A0A075B617 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav16d-dv11A0A075B617 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16d-dv11A0A075B617 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav16d-dv11A0A075B617 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Trav16d-dv11A0A075B617 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16d-dv11A0A075B617 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav16d-dv11A0A075B617 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav16d-dv11A0A075B617 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms