Protein–RNA interactions for Protein: A0A075B5X4

Ighv8-11, Immunoglobulin heavy variable V8-11 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-11A0A075B5X4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-11A0A075B5X4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-11A0A075B5X4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv8-11A0A075B5X4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv8-11A0A075B5X4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv8-11A0A075B5X4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv8-11A0A075B5X4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv8-11A0A075B5X4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-11A0A075B5X4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-11A0A075B5X4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ighv8-11A0A075B5X4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.39■□□□□ 0.21
Ighv8-11A0A075B5X4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-11A0A075B5X4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-11A0A075B5X4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv8-11A0A075B5X4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.37■□□□□ 0.21
Ighv8-11A0A075B5X4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-11A0A075B5X4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-11A0A075B5X4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-11A0A075B5X4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-11A0A075B5X4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv8-11A0A075B5X4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-11A0A075B5X4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-11A0A075B5X4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-11A0A075B5X4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-11A0A075B5X4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv8-11A0A075B5X4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-11A0A075B5X4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-11A0A075B5X4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-11A0A075B5X4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-11A0A075B5X4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ighv8-11A0A075B5X4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-11A0A075B5X4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.33■□□□□ 0.2
Ighv8-11A0A075B5X4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv8-11A0A075B5X4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ighv8-11A0A075B5X4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.33■□□□□ 0.2
Ighv8-11A0A075B5X4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv8-11A0A075B5X4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-11A0A075B5X4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-11A0A075B5X4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-11A0A075B5X4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-11A0A075B5X4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv8-11A0A075B5X4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-11A0A075B5X4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-11A0A075B5X4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-11A0A075B5X4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv8-11A0A075B5X4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ighv8-11A0A075B5X4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv8-11A0A075B5X4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv8-11A0A075B5X4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv8-11A0A075B5X4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv8-11A0A075B5X4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv8-11A0A075B5X4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv8-11A0A075B5X4 Particl-201ENSMUST00000205370 1560 ntBASIC16.27■□□□□ 0.2
Ighv8-11A0A075B5X4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.27■□□□□ 0.2
Ighv8-11A0A075B5X4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ighv8-11A0A075B5X4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv8-11A0A075B5X4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv8-11A0A075B5X4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv8-11A0A075B5X4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.26■□□□□ 0.19
Ighv8-11A0A075B5X4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv8-11A0A075B5X4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ighv8-11A0A075B5X4 Gm7432-201ENSMUST00000210343 879 ntBASIC16.25■□□□□ 0.19
Ighv8-11A0A075B5X4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.25■□□□□ 0.19
Ighv8-11A0A075B5X4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ighv8-11A0A075B5X4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv8-11A0A075B5X4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv8-11A0A075B5X4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv8-11A0A075B5X4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.23■□□□□ 0.19
Ighv8-11A0A075B5X4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
Ighv8-11A0A075B5X4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv8-11A0A075B5X4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv8-11A0A075B5X4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv8-11A0A075B5X4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms