Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-55A0A075B5W6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-55A0A075B5W6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-55A0A075B5W6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-55A0A075B5W6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-55A0A075B5W6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-55A0A075B5W6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ighv1-55A0A075B5W6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-55A0A075B5W6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-55A0A075B5W6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-55A0A075B5W6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-55A0A075B5W6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.63■□□□□ 0.57
Ighv1-55A0A075B5W6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-55A0A075B5W6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-55A0A075B5W6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-55A0A075B5W6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-55A0A075B5W6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-55A0A075B5W6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-55A0A075B5W6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ighv1-55A0A075B5W6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ighv1-55A0A075B5W6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-55A0A075B5W6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-55A0A075B5W6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-55A0A075B5W6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ighv1-55A0A075B5W6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-55A0A075B5W6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ighv1-55A0A075B5W6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.58■□□□□ 0.57
Ighv1-55A0A075B5W6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-55A0A075B5W6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.58■□□□□ 0.56
Ighv1-55A0A075B5W6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-55A0A075B5W6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.57■□□□□ 0.56
Ighv1-55A0A075B5W6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.57■□□□□ 0.56
Ighv1-55A0A075B5W6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.57■□□□□ 0.56
Ighv1-55A0A075B5W6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-55A0A075B5W6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-55A0A075B5W6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-55A0A075B5W6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-55A0A075B5W6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-55A0A075B5W6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-55A0A075B5W6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.55■□□□□ 0.56
Ighv1-55A0A075B5W6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-55A0A075B5W6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.55■□□□□ 0.56
Ighv1-55A0A075B5W6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ighv1-55A0A075B5W6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-55A0A075B5W6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ighv1-55A0A075B5W6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.53■□□□□ 0.56
Ighv1-55A0A075B5W6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.53■□□□□ 0.56
Ighv1-55A0A075B5W6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-55A0A075B5W6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-55A0A075B5W6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-55A0A075B5W6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ighv1-55A0A075B5W6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-55A0A075B5W6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-55A0A075B5W6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Ighv1-55A0A075B5W6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-55A0A075B5W6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ighv1-55A0A075B5W6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-55A0A075B5W6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.5■□□□□ 0.55
Ighv1-55A0A075B5W6 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.5■□□□□ 0.55
Ighv1-55A0A075B5W6 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.5■□□□□ 0.55
Ighv1-55A0A075B5W6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Ighv1-55A0A075B5W6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-55A0A075B5W6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.48■□□□□ 0.55
Ighv1-55A0A075B5W6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-55A0A075B5W6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-55A0A075B5W6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-55A0A075B5W6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-55A0A075B5W6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-55A0A075B5W6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-55A0A075B5W6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Ighv1-55A0A075B5W6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.46■□□□□ 0.55
Ighv1-55A0A075B5W6 Particl-201ENSMUST00000205370 1560 ntBASIC18.46■□□□□ 0.55
Ighv1-55A0A075B5W6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-55A0A075B5W6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv1-55A0A075B5W6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-55A0A075B5W6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-55A0A075B5W6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-55A0A075B5W6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ighv1-55A0A075B5W6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ighv1-55A0A075B5W6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-55A0A075B5W6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.43■□□□□ 0.54
Ighv1-55A0A075B5W6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ighv1-55A0A075B5W6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ighv1-55A0A075B5W6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-55A0A075B5W6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ighv1-55A0A075B5W6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ighv1-55A0A075B5W6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-55A0A075B5W6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-55A0A075B5W6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms