Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Gm6211-202ENSMUST00000167849 925 ntBASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn5Q9JL35 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm7290-201ENSMUST00000104990 617 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm12918-201ENSMUST00000120234 636 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm15710-201ENSMUST00000121821 636 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm6576-201ENSMUST00000169678 883 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm5075-201ENSMUST00000196916 622 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn5Q9JL35 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn5Q9JL35 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn5Q9JL35 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn5Q9JL35 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Hmgn5Q9JL35 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn5Q9JL35 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn5Q9JL35 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms