Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col9a3A2ACT7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Col9a3A2ACT7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col9a3A2ACT7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col9a3A2ACT7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col9a3A2ACT7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col9a3A2ACT7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gm37935-201ENSMUST00000192012 982 ntBASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col9a3A2ACT7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Col9a3A2ACT7 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gm12350-201ENSMUST00000121208 462 ntBASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col9a3A2ACT7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Gm11594-201ENSMUST00000122313 162 ntBASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col9a3A2ACT7 Gm10060-201ENSMUST00000212002 111 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms