Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.39■□□□□ 0.69
Foxd1Q61345 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.39■□□□□ 0.69
Foxd1Q61345 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Foxd1Q61345 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Gm7638-201ENSMUST00000121348 967 ntBASIC19.38■□□□□ 0.69
Foxd1Q61345 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Gm24841-201ENSMUST00000158676 357 ntBASIC19.38■□□□□ 0.69
Foxd1Q61345 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Gm37722-201ENSMUST00000193757 208 ntBASIC19.38■□□□□ 0.69
Foxd1Q61345 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.38■□□□□ 0.69
Foxd1Q61345 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd1Q61345 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Gm12644-201ENSMUST00000119935 606 ntBASIC19.37■□□□□ 0.69
Foxd1Q61345 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Foxd1Q61345 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Foxd1Q61345 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd1Q61345 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.36■□□□□ 0.69
Foxd1Q61345 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.36■□□□□ 0.69
Foxd1Q61345 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.36■□□□□ 0.69
Foxd1Q61345 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.36■□□□□ 0.69
Foxd1Q61345 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Foxd1Q61345 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Foxd1Q61345 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd1Q61345 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Foxd1Q61345 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Foxd1Q61345 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.35■□□□□ 0.69
Foxd1Q61345 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd1Q61345 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.35■□□□□ 0.69
Foxd1Q61345 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxd1Q61345 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Foxd1Q61345 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Foxd1Q61345 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.34■□□□□ 0.69
Foxd1Q61345 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.34■□□□□ 0.69
Foxd1Q61345 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Gm14494-201ENSMUST00000118786 435 ntBASIC19.34■□□□□ 0.69
Foxd1Q61345 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxd1Q61345 Mir5126-201ENSMUST00000175513 77 ntBASIC19.34■□□□□ 0.69
Foxd1Q61345 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd1Q61345 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxd1Q61345 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxd1Q61345 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Foxd1Q61345 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxd1Q61345 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Foxd1Q61345 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Foxd1Q61345 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxd1Q61345 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.33■□□□□ 0.68
Foxd1Q61345 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Gm15794-201ENSMUST00000120182 631 ntBASIC19.33■□□□□ 0.68
Foxd1Q61345 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Foxd1Q61345 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.33■□□□□ 0.68
Foxd1Q61345 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms