Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.85■□□□□ 0.45
Trim43aQ3TL54 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim43aQ3TL54 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Dio3-201ENSMUST00000097228 1449 ntBASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim43aQ3TL54 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim43aQ3TL54 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Gm13168-201ENSMUST00000121771 632 ntBASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim43aQ3TL54 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim43aQ3TL54 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms