Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Thumpd3P97770 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Thumpd3P97770 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd3P97770 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.13■□□□□ 0.33
Thumpd3P97770 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Thumpd3P97770 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd3P97770 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.13■□□□□ 0.33
Thumpd3P97770 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Gm37055-201ENSMUST00000191866 133 ntBASIC17.12■□□□□ 0.33
Thumpd3P97770 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Thumpd3P97770 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
Thumpd3P97770 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Thumpd3P97770 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd3P97770 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.11■□□□□ 0.33
Thumpd3P97770 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
Thumpd3P97770 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Thumpd3P97770 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Thumpd3P97770 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.11■□□□□ 0.33
Thumpd3P97770 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Thumpd3P97770 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.11■□□□□ 0.33
Thumpd3P97770 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd3P97770 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.1■□□□□ 0.33
Thumpd3P97770 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Thumpd3P97770 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.1■□□□□ 0.33
Thumpd3P97770 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Thumpd3P97770 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd3P97770 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms