Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Gm44549-201ENSMUST00000208351 577 ntBASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Gm7291-201ENSMUST00000199147 382 ntBASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn5Q9JL35 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 AC107711.5-202ENSMUST00000226429 702 ntBASIC19■□□□□ 0.63
Hmgn5Q9JL35 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19■□□□□ 0.63
Hmgn5Q9JL35 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Hmgn5Q9JL35 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Gm6365-201ENSMUST00000054711 744 ntBASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hmgn5Q9JL35 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn5Q9JL35 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn5Q9JL35 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hmgn5Q9JL35 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgn5Q9JL35 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms