Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.92■□□□□ 0.3
Pfdn6Q03958 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn6Q03958 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.91■□□□□ 0.3
Pfdn6Q03958 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Odf3b-204ENSMUST00000227834 930 ntBASIC16.91■□□□□ 0.3
Pfdn6Q03958 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.91■□□□□ 0.3
Pfdn6Q03958 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.91■□□□□ 0.3
Pfdn6Q03958 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn6Q03958 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Gm7638-201ENSMUST00000121348 967 ntBASIC16.9■□□□□ 0.3
Pfdn6Q03958 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.9■□□□□ 0.3
Pfdn6Q03958 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Pfdn6Q03958 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pfdn6Q03958 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pfdn6Q03958 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pfdn6Q03958 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pfdn6Q03958 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.89■□□□□ 0.29
Pfdn6Q03958 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms