Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.19■□□□□ 0.34
Thumpd3P97770 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Thumpd3P97770 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.19■□□□□ 0.34
Thumpd3P97770 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thumpd3P97770 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Gm13401-201ENSMUST00000117074 291 ntBASIC17.18■□□□□ 0.34
Thumpd3P97770 Mir2861-201ENSMUST00000175539 82 ntBASIC17.18■□□□□ 0.34
Thumpd3P97770 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Thumpd3P97770 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd3P97770 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.17■□□□□ 0.34
Thumpd3P97770 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.17■□□□□ 0.34
Thumpd3P97770 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.17■□□□□ 0.34
Thumpd3P97770 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.17■□□□□ 0.34
Thumpd3P97770 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd3P97770 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Mir1199-201ENSMUST00000117015 119 ntBASIC17.16■□□□□ 0.34
Thumpd3P97770 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.16■□□□□ 0.34
Thumpd3P97770 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Mtag2-201ENSMUST00000058665 714 ntBASIC17.16■□□□□ 0.34
Thumpd3P97770 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Thumpd3P97770 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd3P97770 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.15■□□□□ 0.34
Thumpd3P97770 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd3P97770 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.15■□□□□ 0.34
Thumpd3P97770 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Thumpd3P97770 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms