Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933424G06RikA0A140LIP3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.21■□□□□ 0.35
4933424G06RikA0A140LIP3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
4933424G06RikA0A140LIP3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
4933424G06RikA0A140LIP3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Gm17807-201ENSMUST00000186869 298 ntBASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933424G06RikA0A140LIP3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933424G06RikA0A140LIP3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
4933424G06RikA0A140LIP3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms