Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
Gm4559A4IF42 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Gm4559A4IF42 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Gm4559A4IF42 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Gm4559A4IF42 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
Gm4559A4IF42 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Mir542-201ENSMUST00000102186 85 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm26247-201ENSMUST00000116702 91 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 DQ267100-201ENSMUST00000122600 72 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm23592-201ENSMUST00000157859 117 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm24963-201ENSMUST00000157916 144 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm22430-201ENSMUST00000158546 107 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm24843-201ENSMUST00000158682 76 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm25476-201ENSMUST00000175125 185 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm23289-201ENSMUST00000175615 108 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Mir7225-201ENSMUST00000184178 54 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm27443-201ENSMUST00000184660 98 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm28030-201ENSMUST00000184987 138 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Mir7021-201ENSMUST00000197026 63 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Mir7229-201ENSMUST00000197062 53 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 AC134596.2-201ENSMUST00000222158 171 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Gm26224-201ENSMUST00000082506 80 ntBASIC0.39□□□□□ -2.35
Gm4559A4IF42 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Gm4559A4IF42 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm23010-201ENSMUST00000104151 126 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm25526-201ENSMUST00000104332 132 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm23980-201ENSMUST00000157135 158 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm23231-201ENSMUST00000157299 104 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm24808-201ENSMUST00000157993 118 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm24075-201ENSMUST00000158175 72 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm24736-201ENSMUST00000158862 130 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm23918-201ENSMUST00000175253 106 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir15a-201ENSMUST00000175266 84 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir3109-201ENSMUST00000175301 88 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm22566-201ENSMUST00000175541 85 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm22264-201ENSMUST00000178200 107 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir7013-201ENSMUST00000183540 72 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir7017-201ENSMUST00000184894 62 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm23735-201ENSMUST00000082551 134 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 n-R5s42-201ENSMUST00000082697 104 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Snord96a-201ENSMUST00000082791 81 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir93-201ENSMUST00000083593 88 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir184-201ENSMUST00000083662 69 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Gm24704-201ENSMUST00000093715 107 ntBASIC0.38□□□□□ -2.35
Gm4559A4IF42 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
Gm4559A4IF42 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm25279-201ENSMUST00000122608 133 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm23889-201ENSMUST00000122689 104 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm22385-201ENSMUST00000158189 101 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm24879-201ENSMUST00000158386 143 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm23268-201ENSMUST00000175494 78 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Mir5123-201ENSMUST00000177794 83 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm25596-201ENSMUST00000178368 107 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Mir7242-201ENSMUST00000183710 79 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Mir7682-201ENSMUST00000198467 58 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Mir7015-201ENSMUST00000199525 64 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 AC167721.1-201ENSMUST00000217088 279 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 AC127578.1-201ENSMUST00000227289 93 ntBASIC0.37□□□□□ -2.35
Gm4559A4IF42 Gm26131-201ENSMUST00000082725 110 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 167.7 ms