Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hmgn5Q9JL35 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Hmgn5Q9JL35 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn5Q9JL35 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn5Q9JL35 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn5Q9JL35 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn5Q9JL35 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hmgn5Q9JL35 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Gm10493-201ENSMUST00000097270 612 ntBASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn5Q9JL35 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgn5Q9JL35 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms