Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Rtl1Q7M732 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC30.07■■■□□ 2.4
Rtl1Q7M732 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Rtl1Q7M732 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rtl1Q7M732 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC30.07■■■□□ 2.4
Rtl1Q7M732 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Olfr129-201ENSMUST00000122318 993 ntBASIC30.06■■■□□ 2.4
Rtl1Q7M732 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtl1Q7M732 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rtl1Q7M732 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
Rtl1Q7M732 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC30.05■■■□□ 2.4
Rtl1Q7M732 Gm45328-201ENSMUST00000210942 917 ntBASIC30.05■■■□□ 2.4
Rtl1Q7M732 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rtl1Q7M732 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Rtl1Q7M732 Gm10052-201ENSMUST00000168019 960 ntBASIC30.05■■■□□ 2.4
Rtl1Q7M732 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rtl1Q7M732 Gm7729-201ENSMUST00000050143 801 ntBASIC30.05■■■□□ 2.4
Rtl1Q7M732 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Gm27742-201ENSMUST00000184667 60 ntBASIC30.04■■■□□ 2.4
Rtl1Q7M732 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC30.04■■■□□ 2.4
Rtl1Q7M732 Gfra2-202ENSMUST00000227633 1480 ntBASIC30.04■■■□□ 2.4
Rtl1Q7M732 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rtl1Q7M732 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rtl1Q7M732 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rtl1Q7M732 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rtl1Q7M732 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rtl1Q7M732 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Mir3081-201ENSMUST00000175305 84 ntBASIC30.02■■■□□ 2.4
Rtl1Q7M732 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rtl1Q7M732 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
Rtl1Q7M732 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rtl1Q7M732 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Rtl1Q7M732 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Rtl1Q7M732 Ighv6-1-201ENSMUST00000193612 343 ntBASIC30.01■■■□□ 2.39
Rtl1Q7M732 Gm34391-201ENSMUST00000203706 907 ntBASIC30.01■■■□□ 2.39
Rtl1Q7M732 AC153889.1-201ENSMUST00000219257 330 ntBASIC30.01■■■□□ 2.39
Rtl1Q7M732 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rtl1Q7M732 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtl1Q7M732 Gm29707-201ENSMUST00000196325 491 ntBASIC30■■■□□ 2.39
Rtl1Q7M732 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC30■■■□□ 2.39
Rtl1Q7M732 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC30■■■□□ 2.39
Rtl1Q7M732 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtl1Q7M732 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtl1Q7M732 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtl1Q7M732 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC29.99■■■□□ 2.39
Rtl1Q7M732 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rtl1Q7M732 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rtl1Q7M732 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC29.99■■■□□ 2.39
Rtl1Q7M732 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtl1Q7M732 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Spr-ps1-201ENSMUST00000089584 605 ntBASIC29.97■■■□□ 2.39
Rtl1Q7M732 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Haglr-201ENSMUST00000100000 2085 ntBASIC29.97■■■□□ 2.39
Rtl1Q7M732 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtl1Q7M732 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 AC124569.2-201ENSMUST00000225998 818 ntBASIC29.96■■■□□ 2.39
Rtl1Q7M732 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Rtl1Q7M732 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rtl1Q7M732 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms