Protein–RNA interactions for Protein: Q64131

Runx3, Runt-related transcription factor 3, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx3Q64131 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Runx3Q64131 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.12■□□□□ 0.33
Runx3Q64131 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Mzt1-203ENSMUST00000227948 952 ntBASIC17.12■□□□□ 0.33
Runx3Q64131 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Runx3Q64131 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Runx3Q64131 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Runx3Q64131 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Runx3Q64131 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
Runx3Q64131 Gm44771-201ENSMUST00000206975 626 ntBASIC17.11■□□□□ 0.33
Runx3Q64131 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Runx3Q64131 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Runx3Q64131 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Runx3Q64131 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
Runx3Q64131 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.1■□□□□ 0.33
Runx3Q64131 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Gm28659-201ENSMUST00000188013 759 ntBASIC17.1■□□□□ 0.33
Runx3Q64131 Gm43347-201ENSMUST00000200226 580 ntBASIC17.1■□□□□ 0.33
Runx3Q64131 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.1■□□□□ 0.33
Runx3Q64131 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.1■□□□□ 0.33
Runx3Q64131 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Runx3Q64131 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.09■□□□□ 0.33
Runx3Q64131 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Runx3Q64131 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Runx3Q64131 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.09■□□□□ 0.33
Runx3Q64131 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Runx3Q64131 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.09■□□□□ 0.33
Runx3Q64131 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.09■□□□□ 0.33
Runx3Q64131 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Runx3Q64131 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Runx3Q64131 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Runx3Q64131 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Runx3Q64131 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Gm15372-201ENSMUST00000120729 834 ntBASIC17.08■□□□□ 0.32
Runx3Q64131 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.08■□□□□ 0.32
Runx3Q64131 Gm5864-201ENSMUST00000202263 970 ntBASIC17.08■□□□□ 0.32
Runx3Q64131 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Runx3Q64131 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Runx3Q64131 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.08■□□□□ 0.32
Runx3Q64131 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Runx3Q64131 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.07■□□□□ 0.32
Runx3Q64131 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Runx3Q64131 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Runx3Q64131 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.07■□□□□ 0.32
Runx3Q64131 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms