Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Ank2-226ENSMUST00000189368 339 ntBASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
4933424G06RikA0A140LIP3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
4933424G06RikA0A140LIP3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4933424G06RikA0A140LIP3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4933424G06RikA0A140LIP3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
4933424G06RikA0A140LIP3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4933424G06RikA0A140LIP3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4933424G06RikA0A140LIP3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
4933424G06RikA0A140LIP3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4933424G06RikA0A140LIP3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Mir770-201ENSMUST00000103252 94 ntBASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.24■□□□□ 0.35
4933424G06RikA0A140LIP3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.23■□□□□ 0.35
4933424G06RikA0A140LIP3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms