Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco4Q9JIS3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smco4Q9JIS3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco4Q9JIS3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco4Q9JIS3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco4Q9JIS3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Smco4Q9JIS3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smco4Q9JIS3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.71□□□□□ -0.22
Smco4Q9JIS3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.71□□□□□ -0.22
Smco4Q9JIS3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smco4Q9JIS3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco4Q9JIS3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms