Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NclP09405 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
NclP09405 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
NclP09405 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
NclP09405 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Mir770-201ENSMUST00000103252 94 ntBASIC25.13■■□□□ 1.61
NclP09405 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC25.13■■□□□ 1.61
NclP09405 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NclP09405 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC25.12■■□□□ 1.61
NclP09405 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
NclP09405 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC25.12■■□□□ 1.61
NclP09405 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NclP09405 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NclP09405 Cxcl14-202ENSMUST00000224801 1467 ntBASIC25.11■■□□□ 1.61
NclP09405 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC25.11■■□□□ 1.61
NclP09405 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC25.11■■□□□ 1.61
NclP09405 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NclP09405 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NclP09405 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NclP09405 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC25.11■■□□□ 1.61
NclP09405 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NclP09405 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC25.1■■□□□ 1.61
NclP09405 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC25.1■■□□□ 1.61
NclP09405 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NclP09405 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NclP09405 Gm8969-201ENSMUST00000199694 526 ntBASIC25.1■■□□□ 1.61
NclP09405 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NclP09405 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NclP09405 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NclP09405 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC25.09■■□□□ 1.61
NclP09405 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NclP09405 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC25.09■■□□□ 1.61
NclP09405 Gm43702-201ENSMUST00000198772 2546 ntBASIC25.09■■□□□ 1.61
NclP09405 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC25.09■■□□□ 1.61
NclP09405 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NclP09405 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NclP09405 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
NclP09405 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
NclP09405 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
NclP09405 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC25.08■■□□□ 1.61
NclP09405 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
NclP09405 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NclP09405 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NclP09405 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
NclP09405 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
NclP09405 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
NclP09405 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
NclP09405 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NclP09405 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NclP09405 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC25.08■■□□□ 1.6
NclP09405 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NclP09405 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
NclP09405 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
NclP09405 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NclP09405 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NclP09405 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NclP09405 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
NclP09405 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NclP09405 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NclP09405 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms