Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtl1Q7M732 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
Rtl1Q7M732 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtl1Q7M732 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Gm8839-201ENSMUST00000121279 1645 ntBASIC30.25■■■□□ 2.43
Rtl1Q7M732 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtl1Q7M732 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Zkscan4-202ENSMUST00000225845 1506 ntBASIC30.24■■■□□ 2.43
Rtl1Q7M732 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtl1Q7M732 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rtl1Q7M732 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rtl1Q7M732 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Rtl1Q7M732 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtl1Q7M732 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Rtl1Q7M732 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rtl1Q7M732 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl1Q7M732 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms