Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mre11Q61216 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mre11Q61216 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mre11Q61216 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mre11Q61216 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.43■□□□□ 0.86
Mre11Q61216 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Mre11Q61216 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
Mre11Q61216 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mre11Q61216 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Mre11Q61216 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Mre11Q61216 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mre11Q61216 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Mre11Q61216 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Mre11Q61216 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Mre11Q61216 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mre11Q61216 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.41■□□□□ 0.86
Mre11Q61216 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mre11Q61216 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Mre11Q61216 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.4■□□□□ 0.86
Mre11Q61216 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.4■□□□□ 0.86
Mre11Q61216 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mre11Q61216 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mre11Q61216 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Mre11Q61216 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mre11Q61216 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mre11Q61216 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.39■□□□□ 0.86
Mre11Q61216 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mre11Q61216 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Mre11Q61216 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.39■□□□□ 0.85
Mre11Q61216 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.39■□□□□ 0.85
Mre11Q61216 Gm6139-201ENSMUST00000079261 882 ntBASIC20.39■□□□□ 0.85
Mre11Q61216 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Mre11Q61216 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mre11Q61216 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Gm26833-201ENSMUST00000180899 440 ntBASIC20.38■□□□□ 0.85
Mre11Q61216 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Mre11Q61216 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.38■□□□□ 0.85
Mre11Q61216 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms