Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thumpd3P97770 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Thumpd3P97770 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.33■□□□□ 0.36
Thumpd3P97770 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.33■□□□□ 0.36
Thumpd3P97770 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Thumpd3P97770 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd3P97770 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Gm13158-201ENSMUST00000122007 736 ntBASIC17.32■□□□□ 0.36
Thumpd3P97770 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Thumpd3P97770 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thumpd3P97770 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Thumpd3P97770 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mir8112-201ENSMUST00000184382 131 ntBASIC17.31■□□□□ 0.36
Thumpd3P97770 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.31■□□□□ 0.36
Thumpd3P97770 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.31■□□□□ 0.36
Thumpd3P97770 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.31■□□□□ 0.36
Thumpd3P97770 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Flg-201ENSMUST00000050758 1488 ntBASIC17.31■□□□□ 0.36
Thumpd3P97770 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Thumpd3P97770 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Thumpd3P97770 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Thumpd3P97770 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.3■□□□□ 0.36
Thumpd3P97770 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Thumpd3P97770 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Thumpd3P97770 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Thumpd3P97770 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.29■□□□□ 0.36
Thumpd3P97770 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Gm15378-201ENSMUST00000121894 207 ntBASIC17.29■□□□□ 0.36
Thumpd3P97770 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.29■□□□□ 0.36
Thumpd3P97770 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.29■□□□□ 0.36
Thumpd3P97770 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Thumpd3P97770 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.28■□□□□ 0.36
Thumpd3P97770 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd3P97770 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd3P97770 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd3P97770 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd3P97770 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Thumpd3P97770 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms