Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25523-201ENSMUST00000178044 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24585-201ENSMUST00000178104 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm22627-201ENSMUST00000178127 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm22912-201ENSMUST00000178242 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24866-201ENSMUST00000178338 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm22524-201ENSMUST00000178357 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25710-201ENSMUST00000178367 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm23575-201ENSMUST00000178406 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24799-201ENSMUST00000178431 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24872-201ENSMUST00000178434 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm22449-201ENSMUST00000178924 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24702-201ENSMUST00000178965 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24206-201ENSMUST00000179011 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24528-201ENSMUST00000179164 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm22909-201ENSMUST00000179190 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm26334-201ENSMUST00000179403 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25463-201ENSMUST00000179405 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25742-201ENSMUST00000179530 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25209-201ENSMUST00000179576 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm26392-201ENSMUST00000179661 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25230-201ENSMUST00000179740 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm26434-201ENSMUST00000179778 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm25741-201ENSMUST00000179825 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24759-201ENSMUST00000179827 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Gm24219-201ENSMUST00000179861 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.74□□□□□ -1.81
Col18a1P39061 Gm23254-201ENSMUST00000097244 79 ntBASIC3.74□□□□□ -1.81
Col18a1P39061 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col18a1P39061 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col18a1P39061 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col18a1P39061 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col18a1P39061 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col18a1P39061 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col18a1P39061 Mir466l-201ENSMUST00000104866 121 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm23889-201ENSMUST00000122689 104 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm27608-201ENSMUST00000184822 162 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm28552-201ENSMUST00000190725 388 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm37732-201ENSMUST00000194377 316 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.73□□□□□ -1.81
Col18a1P39061 Snora31-201ENSMUST00000083213 130 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm25681-201ENSMUST00000083938 106 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm10172-201ENSMUST00000085929 558 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Gm10360-201ENSMUST00000097219 272 ntBASIC3.73□□□□□ -1.81
Col18a1P39061 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col18a1P39061 Gm14876-201ENSMUST00000120795 327 ntBASIC3.72□□□□□ -1.81
Col18a1P39061 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.72□□□□□ -1.81
Col18a1P39061 Gm26414-201ENSMUST00000157674 269 ntBASIC3.72□□□□□ -1.81
Col18a1P39061 Gm37807-201ENSMUST00000194310 190 ntBASIC3.72□□□□□ -1.81
Col18a1P39061 Gm43978-201ENSMUST00000203491 451 ntBASIC3.72□□□□□ -1.81
Col18a1P39061 Gm24762-201ENSMUST00000083689 104 ntBASIC3.72□□□□□ -1.81
Col18a1P39061 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col18a1P39061 Mir669d-201ENSMUST00000104644 121 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm24210-201ENSMUST00000158263 133 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm25520-201ENSMUST00000158389 118 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm16318-201ENSMUST00000162402 601 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm20534-201ENSMUST00000172957 172 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Mir21b-201ENSMUST00000184317 108 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Col18a1P39061 Gm9251-201ENSMUST00000197202 628 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Mir6925-201ENSMUST00000197857 70 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm44391-201ENSMUST00000198490 93 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm44425-201ENSMUST00000203739 429 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.71□□□□□ -1.81
Col18a1P39061 Gm26495-201ENSMUST00000083152 137 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Gm22294-201ENSMUST00000083308 104 ntBASIC3.71□□□□□ -1.81
Col18a1P39061 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col18a1P39061 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col18a1P39061 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col18a1P39061 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col18a1P39061 Gm22752-201ENSMUST00000102083 109 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Mir687-201ENSMUST00000102166 89 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Mir599-201ENSMUST00000102378 88 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm14894-201ENSMUST00000117170 270 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm13210-201ENSMUST00000121483 273 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm15065-201ENSMUST00000121699 273 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm24894-201ENSMUST00000122744 118 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm24717-201ENSMUST00000157522 124 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm17159-201ENSMUST00000169043 482 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm37449-201ENSMUST00000193016 270 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Gm18658-201ENSMUST00000195558 270 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Mir21a-201ENSMUST00000083521 92 ntBASIC3.71□□□□□ -1.82
Col18a1P39061 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col18a1P39061 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Col18a1P39061 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col18a1P39061 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col18a1P39061 Gm26015-201ENSMUST00000104402 125 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Gm23652-201ENSMUST00000116752 107 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.7□□□□□ -1.82
Col18a1P39061 Gm15733-201ENSMUST00000132957 242 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Gm23536-201ENSMUST00000157541 134 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Gm24877-201ENSMUST00000158779 116 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Gm9818-201ENSMUST00000050900 255 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Mir10a-201ENSMUST00000083585 110 ntBASIC3.7□□□□□ -1.82
Col18a1P39061 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms