Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Gm2399-201ENSMUST00000104944 225 ntBASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmgn5Q9JL35 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Zfp783-201ENSMUST00000095946 670 ntBASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgn5Q9JL35 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Mir2861-201ENSMUST00000175539 82 ntBASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgn5Q9JL35 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgn5Q9JL35 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms