Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Mir7071-201ENSMUST00000184847 69 ntBASIC17.38■□□□□ 0.37
Thumpd3P97770 Gm29791-202ENSMUST00000207888 369 ntBASIC17.38■□□□□ 0.37
Thumpd3P97770 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Thumpd3P97770 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd3P97770 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.36■□□□□ 0.37
Thumpd3P97770 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Thumpd3P97770 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd3P97770 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.36■□□□□ 0.37
Thumpd3P97770 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.36■□□□□ 0.37
Thumpd3P97770 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.36■□□□□ 0.37
Thumpd3P97770 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd3P97770 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd3P97770 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd3P97770 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd3P97770 Gm6576-201ENSMUST00000169678 883 ntBASIC17.35■□□□□ 0.37
Thumpd3P97770 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
Thumpd3P97770 Gm38285-201ENSMUST00000192928 922 ntBASIC17.35■□□□□ 0.37
Thumpd3P97770 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Thumpd3P97770 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd3P97770 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Thumpd3P97770 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Thumpd3P97770 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Thumpd3P97770 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd3P97770 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thumpd3P97770 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.37
Thumpd3P97770 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms