Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22983-201ENSMUST00000158308 104 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm22532-201ENSMUST00000158822 140 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm16162-201ENSMUST00000162296 297 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm24085-201ENSMUST00000175172 116 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm23571-201ENSMUST00000180073 127 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm29005-201ENSMUST00000186773 320 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC4.22□□□□□ -1.73
Col18a1P39061 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Col18a1P39061 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Col18a1P39061 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col18a1P39061 Mir450b-201ENSMUST00000102095 82 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Mir291a-201ENSMUST00000104815 82 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col18a1P39061 Gm25045-201ENSMUST00000122670 99 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col18a1P39061 Gm23817-201ENSMUST00000158449 104 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Gm26287-201ENSMUST00000158887 81 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Trav5-2-201ENSMUST00000199855 280 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Gm42785-201ENSMUST00000202316 3835 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Gm44609-201ENSMUST00000207157 460 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC4.21□□□□□ -1.74
Col18a1P39061 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.21□□□□□ -1.74
Col18a1P39061 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Gm38071-201ENSMUST00000195792 3378 ntBASIC4.21□□□□□ -1.74
Col18a1P39061 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Col18a1P39061 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col18a1P39061 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col18a1P39061 Gm24937-201ENSMUST00000122597 134 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm22500-201ENSMUST00000158982 99 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm28660-201ENSMUST00000186496 253 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm44533-201ENSMUST00000207782 268 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm10038-201ENSMUST00000077233 441 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm24950-201ENSMUST00000082768 191 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm23971-201ENSMUST00000083317 191 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm23849-201ENSMUST00000083833 191 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm26316-201ENSMUST00000083886 191 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.2□□□□□ -1.74
Col18a1P39061 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.2□□□□□ -1.74
Col18a1P39061 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col18a1P39061 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col18a1P39061 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col18a1P39061 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col18a1P39061 Gm24234-201ENSMUST00000104316 107 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm11448-201ENSMUST00000120427 450 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm22213-201ENSMUST00000157564 119 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm24546-201ENSMUST00000158652 102 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm24348-201ENSMUST00000158710 130 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col18a1P39061 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col18a1P39061 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col18a1P39061 Gm27636-201ENSMUST00000184528 122 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm44825-201ENSMUST00000207557 150 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm44598-201ENSMUST00000207566 150 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm46194-201ENSMUST00000218136 320 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm23722-201ENSMUST00000083002 130 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm5670-201ENSMUST00000093546 372 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col18a1P39061 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
Col18a1P39061 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm23472-201ENSMUST00000101806 191 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm22782-201ENSMUST00000104082 132 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Mir743b-201ENSMUST00000104751 77 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm16017-201ENSMUST00000119834 208 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm13153-201ENSMUST00000120969 637 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm11430-201ENSMUST00000121317 217 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col18a1P39061 Mir3112-201ENSMUST00000175431 82 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm24497-201ENSMUST00000177868 191 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm25360-201ENSMUST00000178786 191 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm25528-201ENSMUST00000180264 132 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm8874-201ENSMUST00000196826 286 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm19418-201ENSMUST00000197436 580 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.19□□□□□ -1.74
Col18a1P39061 Gm25813-201ENSMUST00000082748 191 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm23444-201ENSMUST00000082922 191 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Gm23039-201ENSMUST00000083870 161 ntBASIC4.19□□□□□ -1.74
Col18a1P39061 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col18a1P39061 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col18a1P39061 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col18a1P39061 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Col18a1P39061 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col18a1P39061 Gm15896-201ENSMUST00000118045 440 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm11819-201ENSMUST00000122192 372 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm24402-201ENSMUST00000157873 91 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm22666-201ENSMUST00000158717 164 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm38080-201ENSMUST00000194035 268 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC4.18□□□□□ -1.74
Col18a1P39061 Gm9795-201ENSMUST00000062156 693 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm26439-201ENSMUST00000082592 106 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Gm24207-201ENSMUST00000082781 108 ntBASIC4.18□□□□□ -1.74
Col18a1P39061 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Col18a1P39061 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Col18a1P39061 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms