Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23618-201ENSMUST00000179912 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm25448-201ENSMUST00000180065 107 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm26284-201ENSMUST00000180107 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24570-201ENSMUST00000180314 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm24654-201ENSMUST00000180315 79 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm27445-201ENSMUST00000184484 72 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm28920-201ENSMUST00000189957 699 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.25□□□□□ -1.73
Col18a1P39061 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm26128-201ENSMUST00000083170 110 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm22577-201ENSMUST00000083731 109 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Col18a1P39061 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm37664-201ENSMUST00000194607 3813 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col18a1P39061 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm6574-201ENSMUST00000120037 362 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Mir6346-201ENSMUST00000183982 81 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm29574-201ENSMUST00000186226 696 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm28828-201ENSMUST00000186601 696 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm28896-201ENSMUST00000188609 696 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm28159-201ENSMUST00000190296 696 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm38107-201ENSMUST00000194873 696 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.25□□□□□ -1.73
Col18a1P39061 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.25□□□□□ -1.73
Col18a1P39061 Mir691-201ENSMUST00000199719 78 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm44016-201ENSMUST00000203463 164 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Gm45380-201ENSMUST00000210465 315 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.25□□□□□ -1.73
Col18a1P39061 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.25□□□□□ -1.73
Col18a1P39061 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Col18a1P39061 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col18a1P39061 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col18a1P39061 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col18a1P39061 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col18a1P39061 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col18a1P39061 Gm24274-201ENSMUST00000116787 124 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm13755-201ENSMUST00000118509 305 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm22227-201ENSMUST00000157356 259 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm24784-201ENSMUST00000157640 62 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm22654-201ENSMUST00000157874 105 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm25716-201ENSMUST00000158628 104 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm26157-201ENSMUST00000158974 126 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm29352-201ENSMUST00000188054 544 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm9379-201ENSMUST00000196790 646 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm45498-201ENSMUST00000210346 283 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC4.24□□□□□ -1.73
Col18a1P39061 Gm10025-201ENSMUST00000079568 372 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col18a1P39061 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.24□□□□□ -1.73
Col18a1P39061 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.24□□□□□ -1.73
Col18a1P39061 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col18a1P39061 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm22553-201ENSMUST00000157797 295 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Gm24131-201ENSMUST00000158539 107 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm23725-201ENSMUST00000177876 107 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm44431-201ENSMUST00000203500 413 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.23□□□□□ -1.73
Col18a1P39061 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.23□□□□□ -1.73
Col18a1P39061 CT025579.1-201ENSMUST00000223779 366 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.23□□□□□ -1.73
Col18a1P39061 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Col18a1P39061 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col18a1P39061 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col18a1P39061 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col18a1P39061 Gm25097-201ENSMUST00000104042 145 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm14296-202ENSMUST00000108931 750 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm13329-201ENSMUST00000117063 265 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm12568-201ENSMUST00000117362 624 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm12261-201ENSMUST00000117499 645 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm22519-201ENSMUST00000158270 178 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm17117-201ENSMUST00000163665 299 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Mir3075-201ENSMUST00000175340 85 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col18a1P39061 Gm25361-201ENSMUST00000179358 76 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.22□□□□□ -1.73
Col18a1P39061 Gm8319-201ENSMUST00000205708 641 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col18a1P39061 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col18a1P39061 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Col18a1P39061 Gm23911-201ENSMUST00000104596 134 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Mir466k-201ENSMUST00000116774 122 ntBASIC4.22□□□□□ -1.73
Col18a1P39061 Gm23887-201ENSMUST00000122683 172 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 189.2 ms