Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Mir7075-201ENSMUST00000184187 82 ntBASIC20.53■□□□□ 0.88
Mre11Q61216 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mre11Q61216 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mre11Q61216 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.52■□□□□ 0.88
Mre11Q61216 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Mre11Q61216 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Mre11Q61216 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Mre11Q61216 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.52■□□□□ 0.88
Mre11Q61216 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Mre11Q61216 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mre11Q61216 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mre11Q61216 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mre11Q61216 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Gm10418-201ENSMUST00000100943 576 ntBASIC20.51■□□□□ 0.87
Mre11Q61216 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Mre11Q61216 Gm44487-201ENSMUST00000205145 325 ntBASIC20.51■□□□□ 0.87
Mre11Q61216 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.51■□□□□ 0.87
Mre11Q61216 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Mre11Q61216 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mre11Q61216 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mre11Q61216 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Mre11Q61216 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.5■□□□□ 0.87
Mre11Q61216 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.5■□□□□ 0.87
Mre11Q61216 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.5■□□□□ 0.87
Mre11Q61216 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.5■□□□□ 0.87
Mre11Q61216 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.5■□□□□ 0.87
Mre11Q61216 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mre11Q61216 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Mre11Q61216 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.49■□□□□ 0.87
Mre11Q61216 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Mre11Q61216 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.49■□□□□ 0.87
Mre11Q61216 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
Mre11Q61216 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mre11Q61216 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.48■□□□□ 0.87
Mre11Q61216 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.48■□□□□ 0.87
Mre11Q61216 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Mre11Q61216 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mre11Q61216 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms