Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim43aQ3TL54 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim43aQ3TL54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43aQ3TL54 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Gm11927-201ENSMUST00000118472 759 ntBASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.13■□□□□ 0.49
Trim43aQ3TL54 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.13■□□□□ 0.49
Trim43aQ3TL54 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43aQ3TL54 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Gm11643-201ENSMUST00000119578 864 ntBASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43aQ3TL54 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Dancr-204ENSMUST00000132389 2347 ntBASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43aQ3TL54 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43aQ3TL54 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms