Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thumpd3P97770 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Thumpd3P97770 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.42■□□□□ 0.38
Thumpd3P97770 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Gm2399-201ENSMUST00000104944 225 ntBASIC17.42■□□□□ 0.38
Thumpd3P97770 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.42■□□□□ 0.38
Thumpd3P97770 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.42■□□□□ 0.38
Thumpd3P97770 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.42■□□□□ 0.38
Thumpd3P97770 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Thumpd3P97770 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thumpd3P97770 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Gm11249-201ENSMUST00000117071 859 ntBASIC17.41■□□□□ 0.38
Thumpd3P97770 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.41■□□□□ 0.38
Thumpd3P97770 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd3P97770 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.4■□□□□ 0.38
Thumpd3P97770 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.4■□□□□ 0.38
Thumpd3P97770 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.4■□□□□ 0.38
Thumpd3P97770 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Thumpd3P97770 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.4■□□□□ 0.38
Thumpd3P97770 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Thumpd3P97770 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd3P97770 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Thumpd3P97770 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Thumpd3P97770 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.39■□□□□ 0.38
Thumpd3P97770 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Thumpd3P97770 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Thumpd3P97770 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Mir6982-201ENSMUST00000184354 68 ntBASIC17.39■□□□□ 0.37
Thumpd3P97770 Gm18666-201ENSMUST00000190039 958 ntBASIC17.39■□□□□ 0.37
Thumpd3P97770 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.39■□□□□ 0.37
Thumpd3P97770 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.39■□□□□ 0.37
Thumpd3P97770 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd3P97770 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.39■□□□□ 0.37
Thumpd3P97770 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd3P97770 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.38■□□□□ 0.37
Thumpd3P97770 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms