Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf1aP25118 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Gm18025-201ENSMUST00000221733 862 ntBASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf1aP25118 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Gm12382-201ENSMUST00000122005 922 ntBASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Trmt13-210ENSMUST00000198454 880 ntBASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Gm42545-201ENSMUST00000202755 922 ntBASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf1aP25118 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf1aP25118 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf1aP25118 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf1aP25118 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf1aP25118 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf1aP25118 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf1aP25118 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf1aP25118 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf1aP25118 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf1aP25118 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf1aP25118 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms