Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NclP09405 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC25.37■■□□□ 1.65
NclP09405 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NclP09405 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC25.36■■□□□ 1.65
NclP09405 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC25.36■■□□□ 1.65
NclP09405 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC25.36■■□□□ 1.65
NclP09405 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
NclP09405 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
NclP09405 Actl10-202ENSMUST00000226583 1501 ntBASIC25.36■■□□□ 1.65
NclP09405 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NclP09405 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC25.36■■□□□ 1.65
NclP09405 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
NclP09405 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
NclP09405 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC25.35■■□□□ 1.65
NclP09405 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC25.35■■□□□ 1.65
NclP09405 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NclP09405 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
NclP09405 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
NclP09405 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 AC154855.1-201ENSMUST00000227353 1458 ntBASIC25.34■■□□□ 1.65
NclP09405 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC25.34■■□□□ 1.65
NclP09405 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
NclP09405 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NclP09405 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
NclP09405 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC25.33■■□□□ 1.65
NclP09405 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC25.33■■□□□ 1.65
NclP09405 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NclP09405 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
NclP09405 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC25.33■■□□□ 1.64
NclP09405 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
NclP09405 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC25.33■■□□□ 1.64
NclP09405 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
NclP09405 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NclP09405 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
NclP09405 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC25.32■■□□□ 1.64
NclP09405 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NclP09405 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NclP09405 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
NclP09405 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
NclP09405 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
NclP09405 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC25.31■■□□□ 1.64
NclP09405 AC154471.1-201ENSMUST00000224418 436 ntBASIC25.31■■□□□ 1.64
NclP09405 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
NclP09405 Gm45606-201ENSMUST00000209836 2795 ntBASIC25.31■■□□□ 1.64
NclP09405 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NclP09405 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
NclP09405 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC25.3■■□□□ 1.64
NclP09405 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NclP09405 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
NclP09405 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
NclP09405 Gm7284-201ENSMUST00000131667 944 ntBASIC25.3■■□□□ 1.64
NclP09405 Gm29518-201ENSMUST00000190858 372 ntBASIC25.3■■□□□ 1.64
NclP09405 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC25.3■■□□□ 1.64
NclP09405 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
NclP09405 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NclP09405 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms