Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.5■□□□□ 0.39
4933424G06RikA0A140LIP3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
4933424G06RikA0A140LIP3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
4933424G06RikA0A140LIP3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
4933424G06RikA0A140LIP3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
4933424G06RikA0A140LIP3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
4933424G06RikA0A140LIP3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.46■□□□□ 0.38
4933424G06RikA0A140LIP3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.45■□□□□ 0.38
4933424G06RikA0A140LIP3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms