Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gm24841-201ENSMUST00000158676 357 ntBASIC15.2■□□□□ 0.02
Trav10A0A075B642 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.19■□□□□ 0.02
Trav10A0A075B642 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.19■□□□□ 0.02
Trav10A0A075B642 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav10A0A075B642 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.18■□□□□ 0.02
Trav10A0A075B642 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.18■□□□□ 0.02
Trav10A0A075B642 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav10A0A075B642 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav10A0A075B642 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.17■□□□□ 0.02
Trav10A0A075B642 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.17■□□□□ 0.02
Trav10A0A075B642 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav10A0A075B642 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav10A0A075B642 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.16■□□□□ 0.02
Trav10A0A075B642 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav10A0A075B642 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav10A0A075B642 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms