Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm37624-201ENSMUST00000193751 219 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Gm23845-201ENSMUST00000083834 152 ntBASIC4.55□□□□□ -1.68
Col18a1P39061 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col18a1P39061 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col18a1P39061 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Col18a1P39061 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col18a1P39061 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col18a1P39061 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col18a1P39061 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col18a1P39061 Gm45461-201ENSMUST00000211726 4535 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Mir711-201ENSMUST00000102188 82 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm14359-201ENSMUST00000118883 424 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm14627-201ENSMUST00000118931 567 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm11830-201ENSMUST00000120175 561 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm6969-201ENSMUST00000140065 342 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm16218-201ENSMUST00000155424 388 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm23892-201ENSMUST00000158105 130 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm25020-201ENSMUST00000178071 107 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm6075-201ENSMUST00000186816 486 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm28924-201ENSMUST00000190012 241 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm37796-201ENSMUST00000195327 134 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.54□□□□□ -1.68
Col18a1P39061 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm22979-201ENSMUST00000082609 159 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Col18a1P39061 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col18a1P39061 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.54□□□□□ -1.68
Col18a1P39061 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col18a1P39061 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col18a1P39061 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col18a1P39061 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.54□□□□□ -1.68
Col18a1P39061 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col18a1P39061 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm15844-201ENSMUST00000118016 576 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Gm22960-201ENSMUST00000122517 104 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm6486-201ENSMUST00000166202 434 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Gm17183-201ENSMUST00000171170 493 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm44657-201ENSMUST00000208568 450 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.53□□□□□ -1.68
Col18a1P39061 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.53□□□□□ -1.68
Col18a1P39061 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col18a1P39061 Gm23705-201ENSMUST00000104370 130 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm12677-201ENSMUST00000118668 426 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm7421-201ENSMUST00000119298 639 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm7365-201ENSMUST00000120877 639 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm8649-201ENSMUST00000181799 233 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Mir7068-201ENSMUST00000183439 74 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm29524-201ENSMUST00000190819 699 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.53□□□□□ -1.69
Col18a1P39061 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Mir19a-201ENSMUST00000083482 82 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.53□□□□□ -1.69
Col18a1P39061 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.69
Col18a1P39061 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col18a1P39061 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Gm13321-201ENSMUST00000117101 400 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Gm14049-201ENSMUST00000121009 636 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Gm28283-201ENSMUST00000185509 178 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.52□□□□□ -1.69
Col18a1P39061 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Gm37966-201ENSMUST00000193122 326 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Gm26164-201ENSMUST00000083793 104 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col18a1P39061 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.52□□□□□ -1.69
Col18a1P39061 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col18a1P39061 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col18a1P39061 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col18a1P39061 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.51□□□□□ -1.69
Col18a1P39061 Gm2005-201ENSMUST00000120759 542 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms