Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YNR025CYNR025C 360 nt-6.94□□□□□ -3.52
VPS13Q07878 snR65snR65 100 nt-6.99□□□□□ -3.53
VPS13Q07878 YCL001W-BYCL001W-B 255 nt-7.27□□□□□ -3.57
VPS13Q07878 snR62snR62 100 nt-7.28□□□□□ -3.57
VPS13Q07878 Q0017Q0017 162 nt-7.35□□□□□ -3.59
VPS13Q07878 YDL240C-AYDL240C-A 138 nt-7.39□□□□□ -3.59
VPS13Q07878 YLR149C-AYLR149C-A 87 nt-7.52□□□□□ -3.61
VPS13Q07878 YGL041C-BYGL041C-B 183 nt-7.75□□□□□ -3.65
VPS13Q07878 YOR231C-AYOR231C-A 201 nt-7.85□□□□□ -3.67
VPS13Q07878 YNL103W-AYNL103W-A 90 nt-7.92□□□□□ -3.68
VPS13Q07878 YMR326CYMR326C 309 nt-8.04□□□□□ -3.7
VPS13Q07878 snR53snR53 91 nt-8.04□□□□□ -3.7
VPS13Q07878 snR61snR61 90 nt-8.13□□□□□ -3.71
VPS13Q07878 YMR046W-AYMR046W-A 129 nt-8.22□□□□□ -3.73
VPS13Q07878 YNL338WYNL338W 159 nt-8.25□□□□□ -3.73
VPS13Q07878 VAR1Q0140 1197 nt-8.34□□□□□ -3.74
VPS13Q07878 YLR466C-BYLR466C-B 117 nt-8.59□□□□□ -3.78
VPS13Q07878 Q0032Q0032 291 nt-8.78□□□□□ -3.82
VPS13Q07878 YLL066W-BYLL066W-B 171 nt-8.81□□□□□ -3.82
VPS13Q07878 tR(UCU)Q1tR(UCU)Q1 73 nt-8.85□□□□□ -3.83
VPS13Q07878 tM(CAU)Q1tM(CAU)Q1 76 nt-9.26□□□□□ -3.89
VPS13Q07878 YHR217CYHR217C 462 nt-9.45□□□□□ -3.92
VPS13Q07878 snR75snR75 89 nt-9.55□□□□□ -3.94
VPS13Q07878 tR(ACG)Q2tR(ACG)Q2 74 nt-10.18□□□□□ -4.04
VPS13Q07878 YDL247W-AYDL247W-A 75 nt-10.62□□□□□ -4.11
VPS13Q07878 YBL109WYBL109W 336 nt-10.88□□□□□ -4.15
VPS13Q07878 ATP8Q0080 147 nt-10.97□□□□□ -4.17
VPS13Q07878 Q0092Q0092 141 nt-12.24□□□□□ -4.37
VPS13Q07878 Q0144Q0144 330 nt-12.35□□□□□ -4.39
Retrieved 29 of 7,029 protein–RNA pairs in 5.9 ms