Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YLR294CYLR294C 330 nt-9.29□□□□□ -3.9
RKR1Q04781 snR64snR64 101 nt-9.33□□□□□ -3.9
RKR1Q04781 snR65snR65 100 nt-9.41□□□□□ -3.92
RKR1Q04781 YCL001W-BYCL001W-B 255 nt-9.46□□□□□ -3.92
RKR1Q04781 Q0017Q0017 162 nt-9.58□□□□□ -3.94
RKR1Q04781 snR62snR62 100 nt-9.69□□□□□ -3.96
RKR1Q04781 tR(UCU)Q1tR(UCU)Q1 73 nt-9.8□□□□□ -3.98
RKR1Q04781 YGL041C-BYGL041C-B 183 nt-10.08□□□□□ -4.02
RKR1Q04781 YLR149C-AYLR149C-A 87 nt-10.23□□□□□ -4.05
RKR1Q04781 YOR231C-AYOR231C-A 201 nt-10.46□□□□□ -4.08
RKR1Q04781 snR61snR61 90 nt-10.48□□□□□ -4.09
RKR1Q04781 YNL103W-AYNL103W-A 90 nt-10.51□□□□□ -4.09
RKR1Q04781 YMR046W-AYMR046W-A 129 nt-10.67□□□□□ -4.12
RKR1Q04781 snR53snR53 91 nt-10.69□□□□□ -4.12
RKR1Q04781 VAR1Q0140 1197 nt-11.13□□□□□ -4.19
RKR1Q04781 YNL338WYNL338W 159 nt-11.14□□□□□ -4.19
RKR1Q04781 YLR466C-BYLR466C-B 117 nt-11.2□□□□□ -4.2
RKR1Q04781 YMR326CYMR326C 309 nt-11.26□□□□□ -4.21
RKR1Q04781 Q0032Q0032 291 nt-11.5□□□□□ -4.25
RKR1Q04781 tM(CAU)Q1tM(CAU)Q1 76 nt-11.79□□□□□ -4.3
RKR1Q04781 YLL066W-BYLL066W-B 171 nt-11.81□□□□□ -4.3
RKR1Q04781 tR(ACG)Q2tR(ACG)Q2 74 nt-12.28□□□□□ -4.38
RKR1Q04781 YHR217CYHR217C 462 nt-12.7□□□□□ -4.44
RKR1Q04781 snR75snR75 89 nt-13.28□□□□□ -4.54
RKR1Q04781 YDL247W-AYDL247W-A 75 nt-14.39□□□□□ -4.71
RKR1Q04781 YBL109WYBL109W 336 nt-14.43□□□□□ -4.72
RKR1Q04781 ATP8Q0080 147 nt-14.47□□□□□ -4.73
RKR1Q04781 Q0144Q0144 330 nt-14.66□□□□□ -4.76
RKR1Q04781 Q0092Q0092 141 nt-16.4□□□□□ -5.03
Retrieved 29 of 7,029 protein–RNA pairs in 55.4 ms