Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 YOR225WYOR225W 330 nt-4.3□□□□□ -3.1
TY1B-PR2P0C2J0 snR40snR40 97 nt-4.32□□□□□ -3.1
TY1B-PR2P0C2J0 YCL001W-BYCL001W-B 255 nt-4.36□□□□□ -3.11
TY1B-PR2P0C2J0 VAR1Q0140 1197 nt-4.4□□□□□ -3.11
TY1B-PR2P0C2J0 snR64snR64 101 nt-4.43□□□□□ -3.12
TY1B-PR2P0C2J0 snR62snR62 100 nt-4.46□□□□□ -3.12
TY1B-PR2P0C2J0 YLR294CYLR294C 330 nt-4.52□□□□□ -3.13
TY1B-PR2P0C2J0 YOR231C-AYOR231C-A 201 nt-4.55□□□□□ -3.14
TY1B-PR2P0C2J0 YMR046W-AYMR046W-A 129 nt-4.61□□□□□ -3.15
TY1B-PR2P0C2J0 YNL103W-AYNL103W-A 90 nt-4.65□□□□□ -3.15
TY1B-PR2P0C2J0 YGL041C-BYGL041C-B 183 nt-4.73□□□□□ -3.17
TY1B-PR2P0C2J0 snR61snR61 90 nt-4.84□□□□□ -3.18
TY1B-PR2P0C2J0 YLR466C-BYLR466C-B 117 nt-4.87□□□□□ -3.19
TY1B-PR2P0C2J0 YLR149C-AYLR149C-A 87 nt-4.91□□□□□ -3.19
TY1B-PR2P0C2J0 snR53snR53 91 nt-5.03□□□□□ -3.21
TY1B-PR2P0C2J0 YNL338WYNL338W 159 nt-5.06□□□□□ -3.22
TY1B-PR2P0C2J0 Q0032Q0032 291 nt-5.15□□□□□ -3.23
TY1B-PR2P0C2J0 tM(CAU)Q1tM(CAU)Q1 76 nt-5.15□□□□□ -3.23
TY1B-PR2P0C2J0 tR(ACG)Q2tR(ACG)Q2 74 nt-5.29□□□□□ -3.26
TY1B-PR2P0C2J0 Q0143Q0143 153 nt-5.39□□□□□ -3.27
TY1B-PR2P0C2J0 YLL066W-BYLL066W-B 171 nt-5.52□□□□□ -3.29
TY1B-PR2P0C2J0 YMR326CYMR326C 309 nt-5.65□□□□□ -3.31
TY1B-PR2P0C2J0 Q0144Q0144 330 nt-5.8□□□□□ -3.34
TY1B-PR2P0C2J0 YHR217CYHR217C 462 nt-5.83□□□□□ -3.34
TY1B-PR2P0C2J0 snR75snR75 89 nt-6.36□□□□□ -3.43
TY1B-PR2P0C2J0 ATP8Q0080 147 nt-6.5□□□□□ -3.45
TY1B-PR2P0C2J0 YDL247W-AYDL247W-A 75 nt-6.64□□□□□ -3.47
TY1B-PR2P0C2J0 YBL109WYBL109W 336 nt-6.74□□□□□ -3.49
TY1B-PR2P0C2J0 Q0092Q0092 141 nt-7.3□□□□□ -3.58
Retrieved 29 of 7,029 protein–RNA pairs in 41.6 ms