Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.24■□□□□ 0.03
Trav10A0A075B642 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.24■□□□□ 0.03
Trav10A0A075B642 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Mir1199-201ENSMUST00000117015 119 ntBASIC15.24■□□□□ 0.03
Trav10A0A075B642 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav10A0A075B642 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.23■□□□□ 0.03
Trav10A0A075B642 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.23■□□□□ 0.03
Trav10A0A075B642 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav10A0A075B642 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Gm10812-201ENSMUST00000099864 546 ntBASIC15.22■□□□□ 0.03
Trav10A0A075B642 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav10A0A075B642 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Gm12085-201ENSMUST00000119263 940 ntBASIC15.21■□□□□ 0.03
Trav10A0A075B642 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav10A0A075B642 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.21■□□□□ 0.03
Trav10A0A075B642 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.21■□□□□ 0.03
Trav10A0A075B642 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Trav10A0A075B642 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav10A0A075B642 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav10A0A075B642 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav10A0A075B642 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav10A0A075B642 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.2■□□□□ 0.02
Trav10A0A075B642 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.2■□□□□ 0.02
Trav10A0A075B642 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav10A0A075B642 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms