Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PrkdcP97313 Gm45687-201ENSMUST00000209454 155 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm45445-201ENSMUST00000209586 232 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.05□□□□□ -2.24
PrkdcP97313 AC126690.1-201ENSMUST00000228898 397 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm25506-201ENSMUST00000104339 70 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PrkdcP97313 Gm20915-201ENSMUST00000191575 663 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm14930-201ENSMUST00000118864 652 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm25279-201ENSMUST00000122608 133 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm27155-201ENSMUST00000183716 898 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Mir7021-201ENSMUST00000197026 63 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm16261-201ENSMUST00000096813 205 ntBASIC1.05□□□□□ -2.24
PrkdcP97313 Gm23137-201ENSMUST00000157559 107 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm8292-201ENSMUST00000162574 396 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PrkdcP97313 Mir7063-201ENSMUST00000184158 91 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm29604-201ENSMUST00000187176 163 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm6801-201ENSMUST00000190697 339 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Mir196b-201ENSMUST00000083509 85 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Mir343-201ENSMUST00000102360 75 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
PrkdcP97313 Gm27245-201ENSMUST00000184385 376 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm23435-201ENSMUST00000157183 156 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
PrkdcP97313 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.04□□□□□ -2.24
PrkdcP97313 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.04□□□□□ -2.24
PrkdcP97313 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.04□□□□□ -2.24
PrkdcP97313 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
PrkdcP97313 Mir365-2-201ENSMUST00000083555 112 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm42537-201ENSMUST00000198260 2574 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm22389-201ENSMUST00000158193 301 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm17161-201ENSMUST00000169187 524 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
PrkdcP97313 Gm20039-201ENSMUST00000210329 394 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Gm16976-205ENSMUST00000227324 226 ntBASIC1.04□□□□□ -2.24
PrkdcP97313 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
PrkdcP97313 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 AC073947.1-201ENSMUST00000216991 649 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
PrkdcP97313 Gm17062-201ENSMUST00000166987 461 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 Gm37708-201ENSMUST00000192337 895 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 Gm26126-201ENSMUST00000083188 164 ntBASIC1.03□□□□□ -2.24
PrkdcP97313 Gm6429-201ENSMUST00000117144 475 ntBASIC1.03□□□□□ -2.25
PrkdcP97313 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.03□□□□□ -2.25
PrkdcP97313 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC1.03□□□□□ -2.25
PrkdcP97313 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.03□□□□□ -2.25
PrkdcP97313 Gm22853-201ENSMUST00000174974 131 ntBASIC1.03□□□□□ -2.25
PrkdcP97313 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.03□□□□□ -2.25
PrkdcP97313 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.25
PrkdcP97313 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.03□□□□□ -2.25
PrkdcP97313 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm14659-201ENSMUST00000117667 843 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Gm18546-201ENSMUST00000197245 676 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm23221-201ENSMUST00000158118 93 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Gm6395-201ENSMUST00000167639 691 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm23152-201ENSMUST00000175322 116 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm12351-201ENSMUST00000118727 292 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm5224-201ENSMUST00000183060 350 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Gm37337-201ENSMUST00000192601 993 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Gm9068-201ENSMUST00000217393 455 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 Gm24252-201ENSMUST00000083700 132 ntBASIC1.02□□□□□ -2.25
PrkdcP97313 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PrkdcP97313 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
PrkdcP97313 Gm12386-201ENSMUST00000117380 688 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm13355-201ENSMUST00000117996 317 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm14898-201ENSMUST00000120202 645 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm28974-201ENSMUST00000187893 231 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm21742-201ENSMUST00000189352 548 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm37281-201ENSMUST00000192412 439 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm43489-201ENSMUST00000196810 993 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm18982-201ENSMUST00000198118 529 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Gm45049-201ENSMUST00000207586 591 ntBASIC1.01□□□□□ -2.25
PrkdcP97313 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 147.4 ms