Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col18a1P39061 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col18a1P39061 Gm25938-201ENSMUST00000104139 166 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm14622-201ENSMUST00000117117 468 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm25106-201ENSMUST00000122672 134 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm25339-201ENSMUST00000157458 232 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm25706-201ENSMUST00000157828 247 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm23191-201ENSMUST00000179147 107 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.9□□□□□ -1.63
Col18a1P39061 Gm45395-201ENSMUST00000209891 559 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col18a1P39061 Snora23-201ENSMUST00000082517 184 ntBASIC4.9□□□□□ -1.63
Col18a1P39061 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col18a1P39061 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col18a1P39061 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col18a1P39061 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col18a1P39061 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col18a1P39061 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col18a1P39061 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col18a1P39061 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm12793-201ENSMUST00000119268 292 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm13443-201ENSMUST00000120770 555 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm26214-201ENSMUST00000158581 107 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm26022-201ENSMUST00000158663 108 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm22308-201ENSMUST00000177609 107 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm29097-201ENSMUST00000190273 422 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Gm32447-201ENSMUST00000194265 697 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.89□□□□□ -1.63
Col18a1P39061 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.89□□□□□ -1.63
Col18a1P39061 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Col18a1P39061 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col18a1P39061 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col18a1P39061 Gm43872-201ENSMUST00000203218 2213 ntBASIC4.89□□□□□ -1.63
Col18a1P39061 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Col18a1P39061 Gm24067-201ENSMUST00000104514 85 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 Gm26027-201ENSMUST00000122725 268 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 Gm22034-201ENSMUST00000157283 134 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm21827-201ENSMUST00000178247 423 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Mir6413-201ENSMUST00000184049 108 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm7871-201ENSMUST00000195346 618 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm23503-201ENSMUST00000083903 107 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col18a1P39061 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 Gm13804-201ENSMUST00000119552 172 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm15190-201ENSMUST00000120855 276 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm26102-201ENSMUST00000157251 284 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm27532-201ENSMUST00000183726 113 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Gm43315-201ENSMUST00000198120 313 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.88□□□□□ -1.63
Col18a1P39061 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.88□□□□□ -1.63
Col18a1P39061 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col18a1P39061 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col18a1P39061 Gm44676-201ENSMUST00000208520 3055 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col18a1P39061 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col18a1P39061 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col18a1P39061 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
Col18a1P39061 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gm23836-201ENSMUST00000104434 129 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gm6762-201ENSMUST00000121769 289 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gm25784-201ENSMUST00000122524 81 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gm28717-201ENSMUST00000189950 315 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gm32340-201ENSMUST00000192883 259 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col18a1P39061 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col18a1P39061 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col18a1P39061 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.87□□□□□ -1.63
Col18a1P39061 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col18a1P39061 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col18a1P39061 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms